dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03722
Location and strand information: 76197 - 77297 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03723
Location and strand information: 77297 - 78379 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03724
Location and strand information: 78515 - 80848 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03725
Location and strand information: 81078 - 81734 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03726
Location and strand information: 81731 - 82456 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.4094
Protein molecular weight: 26844.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03727
Location and strand information: 82498 - 82770 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03728
Location and strand information: 82767 - 83621 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03729
Location and strand information: 83667 - 84158 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03730
Location and strand information: 84241 - 84528 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03731
Location and strand information: 84551 - 85984 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03732
Location and strand information: 86032 - 86757 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03733
Location and strand information: 86764 - 87318 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03734
Location and strand information: 87287 - 87862 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03735
Location and strand information: 87859 - 88425 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03736
Location and strand information: 88440 - 89426 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03737
Location and strand information: 89440 - 90417 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03738
Location and strand information: 90645 - 91457 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03739
Location and strand information: 91465 - 92247 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03740
Location and strand information: 92252 - 92800 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03741
Location and strand information: 92819 - 93454 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000002499_13|CGC1
Gene ID: MGYG000002499_03742
Location and strand information: 93454 - 93747 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002499_03722	Lipopolysaccharide export system permease protein LptF	TC	76197	77297	+	1.B.42.1.2
MGYG000002499_03723	Lipopolysaccharide export system permease protein LptG	TC	77297	78379	+	1.B.42.1.2
MGYG000002499_03724	Aerobic respiration control sensor protein ArcB	STP	78515	80848	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000002499_03725	Glyoxalase ElbB	null	81078	81734	+	No domain
MGYG000002499_03726	Biosynthetic peptidoglycan transglycosylase	CAZyme	81731	82456	+	GT51
MGYG000002499_03727	Phosphocarrier protein NPr	TC	82498	82770	-	8.A.8.1.5
MGYG000002499_03728	RNase adapter protein RapZ	null	82767	83621	-	ATP_bind_2
MGYG000002499_03729	Nitrogen regulatory protein	TC	83667	84158	-	4.A.2.1.4
MGYG000002499_03730	Ribosome hibernation promoting factor	null	84241	84528	-	Ribosomal_S30AE
MGYG000002499_03731	RNA polymerase sigma-54 factor	null	84551	85984	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000002499_03732	Lipopolysaccharide export system ATP-binding protein LptB	TC	86032	86757	-	1.B.42.1.2
MGYG000002499_03733	Lipopolysaccharide export system protein LptA	TC	86764	87318	-	1.B.42.1.2
MGYG000002499_03734	Lipopolysaccharide export system protein LptC	TC	87287	87862	-	1.B.42.1.2
MGYG000002499_03735	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	87859	88425	-	Hydrolase_3
MGYG000002499_03736	Arabinose 5-phosphate isomerase KdsD	STP	88440	89426	-	SIS\| CBS\| CBS
MGYG000002499_03737	Inner membrane protein YrbG	TC	89440	90417	-	2.A.19.5.1
MGYG000002499_03738	putative phospholipid import ATP-binding protein MlaF	TC	90645	91457	+	3.A.1.27.3
MGYG000002499_03739	putative phospholipid ABC transporter permease protein MlaE	TC	91465	92247	+	3.A.1.27.3
MGYG000002499_03740	putative phospholipid ABC transporter-binding protein MlaD	TC	92252	92800	+	3.A.1.27.3
MGYG000002499_03741	putative phospholipid-binding protein MlaC	TC	92819	93454	+	3.A.1.27.3
MGYG000002499_03742	putative phospholipid ABC transporter-binding protein MlaB	TC	93454	93747	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature